CDS

Accession Number TCMCG005C12212
gbkey CDS
Protein Id XP_020260516.1
Location complement(join(20701706..20701839,20701911..20701987,20703217..20703305,20703453..20703583,20703679..20703808,20708023..20708047,20710408..20710643,20710645..20710722,20710724..20710777))
Gene LOC109836885
GeneID 109836885
Organism Asparagus officinalis

Protein

Length 317aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020404927.1
Definition LOW QUALITY PROTEIN: transcription initiation factor IIB-like

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor IIB
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03124        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009960        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010183        [VIEW IN EMBL-EBI]
GO:0010769        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050918        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051510        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080092        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGATGCGTTCTGCCCTGACTGCAAGCGGAGCACGGAGGTCGTCTTCGACCACTCCGCCGGCGACACCGTCTGCCTCCGAGTGCGGGCTACGTGCTCGAGGCCCACTCGGATCGACGAAACCTCAGAATGGAGGACGTTTGCGAATGAATCGCGGCGAGTAACGATCCGGTTCGCTGATCGGTGGGCCTCTAACCCGCTTCTAACCCGACGGCGGTGCTTTCGGACGGTGATATCGAAGCCGAACTGGGCTGCGCCACAGGGGGATTTTCTGTCCTCGTCGCTTGGTCGTTGGCAGAATCGGGGGTCGAATTCTGATCGGTCGTTGATTTTGGCGTTTCGGACGATTGCTACCATGGCTGATAGGTTAGGTCTTGTTGCCACTATCAAGGACCGAGCCAATGAAATATACAAGAAGGTGGAAGACCTTAAATCCATTAGAGGAAGAAACCAAGATGCAATTTTGGCTGCTTGTCTTTACATTGCTTGTCGACAAGAGGACAGGCCTCGCACTGTAAAGGAAATCTGTTCTGTTGCCAATGGAGCTACAAAGAAGGAAATTGGCCGGGCAAAAGAGTTTATTGTGAAGCAGCTGGAGGTTGAAATGGGTCAATCAATGGAGATGGGCACTATTCATGCGGGAGATTTCCTGAGGCGTTTCTGTTCATCTCTTGGCATGGCTAACCAAGCTGTTAAAGCTGCTCAAGAAGCAGTTCAGAAGTCAGAAGAACTTGATATAAGGAGGAGCCCCATATCTATTGCAGCAGCTGTTATTTATATCATAACACAATTGTCAGAAGAGAAGAAACTTCTAAGAGATATCTCAGTGGCAACGGGAGTAGCAGAAGGCACCATACGAAATTCATATAAGGATCTGCATCCCTATGTTGCCAAGATTATTCCAACTTGGTTTGCTAAGGAAGAGGATCTCAAAAATCTCTGCAGCCCATAA
Protein:  
MSDAFCPDCKRSTEVVFDHSAGDTVCLRVRATCSRPTRIDETSEWRTFANESRRVTIRFADRWASNPLLTRRRCFRTVISKPNWAAPQGDFLSSSLGRWQNRGSNSDRSLILAFRTIATMADRLGLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSSLGMANQAVKAAQEAVQKSEELDIRRSPISIAAAVIYIITQLSEEKKLLRDISVATGVAEGTIRNSYKDLHPYVAKIIPTWFAKEEDLKNLCSP